PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.007G277300.1
Common NamePHAVU_007G277300g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family C2H2
Protein Properties Length: 160aa    MW: 18274.7 Da    PI: 6.6727
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.007G277300.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.000142747323
                        ETTTTEEESSHHHHHHHHHHT CS
             zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                        C+ C+++Fs+ + L  H+ +H
  Phvul.007G277300.1 27 CKLCKQVFSNTEALLIHLESH 47
                        ******************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.122552IPR007087Zinc finger, C2H2
PROSITE patternPS0002802747IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MTNLFYNDVL NYAHLSYLYN NTGPKGCKLC KQVFSNTEAL LIHLESHMAQ EEIAIRRLYS  60
LPQHVNYQKQ FPLQPMGDGR FFQSIGRNPF SNASQIGSSS MPIRRMQVQA QYDASMNDDG  120
SKAYILKLEK PIKHIDFIDL VNTDEDNNSL QQLDLDLKL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007145903.11e-116hypothetical protein PHAVU_007G277300g
TrEMBLV7BJ021e-116V7BJ02_PHAVU; Uncharacterized protein
STRINGGLYMA10G00655.14e-57(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1527958